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rs2229109 (ABCB1)

What you carry at this position in your DNA and what research says about it.

Chemotherapy Response: 5/10 evidence, 5 publications.

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Sample genotype (not yours): C/C

Typical Chemotherapy Response and Side Effect Risk

This genotype is associated with standard P-glycoprotein transporter activity. It represents the typical baseline response and side effect profile for various chemotherapy drugs.

What this genotype means: Standard drug transport; Typical chemotherapy side effect profile.

Sample genotype (not yours): C/T

Altered Chemotherapy Response and Mixed Treatment Outcomes

This genotype is linked to poorer response to some chemotherapies but better survival with specific myeloma treatments. It also increases the risk of certain treatment-related side effects.

What this genotype means: Altered drug transport efficiency; Increased risk of chemotherapy-induced diarrhea and vomiting; Potentially improved survival with lenalidomide and dexamethasone.

Sample genotype (not yours): T/T

This extremely rare genotype is expected to show altered drug transport, leading to drug-specific changes in chemotherapy response and side effects.

About ABCB1

Gene function and biological role

Gene Function: The ABCB1 gene encodes P-glycoprotein, a vital cellular efflux pump that transports various substances out of cells [1]. This transporter is highly active in the gut, liver, kidneys, and the blood-brain barrier, where it helps protect tissues from toxins [1]. P-glycoprotein also plays a major role in determining how the body processes and eliminates many common medications, including chemotherapy drugs [2]. Variations in this gene can alter the pump's efficiency, leading to differences in drug accumulation and effectiveness [2].

Variant Impact: This missense variant, also known as Ser400Asn or 1199C>T, changes the amino acid serine to asparagine at position 400 of the P-glycoprotein transporter. Located in a cytoplasmic loop involved in substrate recognition, this alteration can modify how effectively the pump binds and exports specific drugs. Clinical studies show that this change does not cause any standalone genetic disorders, meaning it is considered benign for disease risk. However, it significantly influences the pharmacokinetics and toxicity profiles of several oncology treatments [3] [4].

Key Insight: This variant can make some cancer drugs less effective while actually improving survival outcomes for others.

Location: ABCB1. Chromosome 7 · 7q21.12 · 87.6 Mb

Genotype Frequencies

Estimated prevalence by population

Global 95.0%; European 92.1%; African 98.6%; East Asian 100.0%; South Asian 97.6%; Americas 94.5%; Ashkenazi 94.5%; Finnish 97.0%; Middle Eastern 92.7%; Amish 89.5%.

Estimated CC genotype frequency.

Global 4.9%; European 7.7%; African 1.4%; East Asian 0.0%; South Asian 2.4%; Americas 5.4%; Ashkenazi 5.4%; Finnish 3.0%; Middle Eastern 7.2%; Amish 10.2%.

Estimated CT genotype frequency.

Global 0.1%; European 0.2%; African < 0.1%; East Asian 0.0%; South Asian < 0.1%; Americas 0.1%; Ashkenazi 0.1%; Finnish < 0.1%; Middle Eastern 0.1%; Amish 0.3%.

Estimated TT genotype frequency.

Associated Traits

Showing effects for C/C genotype

Pharmacogenomics

Chemotherapy Response

Chemotherapy Response. Evidence: 5/10. Source: PMID 25582575. Typical Response.

Chemotherapy Toxicity. Evidence: 5/10. Source: PMID 25637052. Typical Risk.

Cancer & Oncology

Cancer Prognosis & Treatment Outcome

Myeloma Survival. Evidence: 5/10. Source: PMID 29177954. Typical Survival.

Showing effects for C/T genotype

Chemotherapy Response. Evidence: 5/10. Source: PMID 25582575. Poorer Response.

Chemotherapy Toxicity. Evidence: 5/10. Source: PMID 25637052. Increased Risk.

Myeloma Survival. Evidence: 5/10. Source: PMID 29177954. Increased Survival.

Showing effects for T/T genotype

What CC Genotype Means

What this genotype means for the people who carry it

Sample genotype: CC (Homozygous)

Carrying two copies of the common C allele results in standard P-glycoprotein function. Individuals with this genotype generally experience typical absorption, distribution, and elimination of many medications [1]. In clinical studies of childhood acute lymphoblastic leukemia, this baseline function is associated with standard treatment outcomes when using drugs like vincristine and doxorubicin [1]. Similarly, patients undergoing R-CHOP therapy for lymphoma show typical rates of treatment-related side effects such as diarrhea and vomiting [2]. For multiple myeloma treatments involving lenalidomide, this genotype is linked to standard survival rates [3].

Standard drug transport; Typical chemotherapy side effect profile.

What CT Genotype Means

Sample genotype: CT (Heterozygous)

Carrying one copy of the T allele alters the substrate-binding region of the P-glycoprotein transporter. In pediatric leukemia treatments, this change is associated with a poorer response to medications like vincristine, doxorubicin, methotrexate, and prednisolone [1]. Patients receiving R-CHOP regimens for non-Hodgkin lymphoma also show an increased risk of experiencing side effects such as diarrhea and vomiting [2]. Conversely, in multiple myeloma patients treated with lenalidomide and dexamethasone, this genotype is linked to an increased likelihood of survival [3]. These contrasting outcomes highlight how a single genetic change can have highly drug-specific effects.

Altered drug transport efficiency; Increased risk of chemotherapy-induced diarrhea and vomiting; Potentially improved survival with lenalidomide and dexamethasone.

What TT Genotype Means

Sample genotype: TT (Homozygous)

Carrying two copies of the rare T allele is highly uncommon, occurring in less than one in a thousand individuals globally. While direct clinical data for this specific homozygous genotype are limited, it is expected to mirror or potentially amplify the effects seen in single-copy carriers. This includes a potentially poorer response to standard leukemia therapies such as vincristine and methotrexate [1]. It may also elevate the risk of gastrointestinal side effects like diarrhea and vomiting during R-CHOP chemotherapy [2]. However, based on related clinical trials, it might also correlate with improved survival outcomes when using lenalidomide-based regimens for multiple myeloma [3].

Related Variants

Variants with shared genetic architecture

rs1045642 · ABCB1 Gene · Chr 7 · Medication Response

rs2032582 · ABCB1 Gene · Chr 7 · Lung Cancer Risk

rs1128503 · ABCB1 Gene · Chr 7 · Medication Response

Sources

No significant effect of ABCB1 haplotypes on the pharmacokinetics of fluvastatin, pravastatin, lovastatin, and rosuvastatin.

Genotyping panel for assessing response to cancer chemotherapy.

Polymorphisms in the ABCB1 gene and effect on outcome and toxicity in childhood acute lymphoblastic leukemia.

Single nucleotide polymorphisms in ABCB1 and CBR1 can predict toxicity to R-CHOP type regimens in patients with diffuse non-Hodgkin lymphoma.

Pharmacogenetic study of the impact of ABCB1 single-nucleotide polymorphisms on lenalidomide treatment outcomes in patients with multiple myeloma: results from a phase IV observational study and subsequent phase II clinical trial.

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Content updated August 2026.

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