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rs662 (PON1)

What you carry at this position in your DNA and what research says about it.

Heart Disease Risk: 5/10 evidence, 65 publications.

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Sample genotype (not yours): T/T

Lower Heart Disease Risk but Slower Chemical Detoxification

Glutamine-containing paraoxonase 1 enzymes are produced by this genotype, offering robust protection against arterial plaque buildup.

What this genotype means: Lower risk of coronary artery disease; Slower detoxification of organophosphate pesticides; Potentially reduced activation of clopidogrel.

Sample genotype (not yours): C/C

Higher Heart Disease Risk but Faster Chemical Detoxification

Arginine-containing paraoxonase 1 enzymes are produced by this genotype, which reduces antioxidant protection in the arteries but speeds up pesticide clearance.

What this genotype means: Increased risk of coronary artery disease; Fastest detoxification of organophosphate pesticides; Enhanced HDL-cholesterol response to simvastatin.

Sample genotype (not yours): T/C

Slightly Higher Heart Disease Risk and Moderate Chemical Detoxification

An intermediate level of paraoxonase 1 enzyme activity characterizes this genotype, resulting in a slightly increased risk of coronary artery disease.

What this genotype means: Slightly increased risk of coronary artery disease; Moderate detoxification of organophosphate pesticides; Typical response to statin therapy.

About PON1

Gene function and biological role

Gene Function: The PON1 gene encodes paraoxonase 1, an enzyme produced in the liver and carried through the bloodstream on high-density lipoprotein HDL particles [1]. This enzyme plays a vital role in cardiovascular health by preventing the oxidation of low-density lipoprotein LDL cholesterol, a key process that triggers plaque buildup in the arteries [2]. Additionally, paraoxonase 1 acts as a detoxifying agent, breaking down harmful organophosphate pesticides, nerve agents, and environmental toxins [3]. It also processes certain medications, including antiplatelet drugs like clopidogrel and statins like simvastatin [4].

Variant Impact: The rs662 variant, commonly known as Q192R, is a missense mutation that changes the 192nd amino acid of the paraoxonase 1 enzyme from glutamine to arginine [1]. This single-letter change alters the enzyme's physical shape, modifying how tightly it binds to HDL particles and changing its catalytic efficiency [1]. The reference T allele encodes glutamine, which provides superior antioxidant protection against LDL oxidation [2]. Conversely, the variant C allele encodes arginine, which increases the enzyme's ability to hydrolyze certain chemical toxins but reduces its capacity to prevent lipid oxidation [3].

Key Insight: The same genetic variant that increases heart disease risk actually makes the body more efficient at neutralizing toxic organophosphate pesticides and chemical nerve agents.

Location: PON1. Chromosome 7 · 7q21.3 · 95.3 Mb

Genotype Frequencies

Estimated prevalence by population

Global 36.4%; European 51.6%; African 10.9%; East Asian 12.8%; South Asian 37.3%; Americas 33.2%; Ashkenazi 45.9%; Finnish 50.0%; Middle Eastern 44.0%; Amish 44.8%.

Estimated TT genotype frequency.

Global 43.0%; European 40.5%; African 44.2%; East Asian 46.0%; South Asian 47.6%; Americas 48.8%; Ashkenazi 43.7%; Finnish 41.4%; Middle Eastern 44.7%; Amish 44.3%.

Estimated TC genotype frequency.

Global 20.7%; European 7.9%; African 44.9%; East Asian 41.2%; South Asian 15.2%; Americas 17.9%; Ashkenazi 10.4%; Finnish 8.6%; Middle Eastern 11.3%; Amish 10.9%.

Estimated CC genotype frequency.

Associated Traits

Showing effects for T/T genotype

Cardiovascular & Metabolic

Heart Disease

Heart Disease. Evidence: 4/10. Source: PMID 24918121. Lower Risk.

Pharmacogenomics

Drug Metabolism Enzyme Activity

Pesticide Sensitivity. Evidence: 3/10. Source: PMID 7916578. Slower Clearance.

Lipid-Lowering Drug Response

Statin Response. Evidence: 5/10. Source: PMID 18430057. Typical Response.

Anticoagulant & Blood Thinner Response

Clopidogrel Response. Evidence: 5/10. Source: PMID 21170047. Reduced Response.

Showing effects for C/C genotype

Heart Disease. Evidence: 4/10. Source: PMID 24918121. Higher Risk.

Pesticide Sensitivity. Evidence: 3/10. Source: PMID 7916578. Fastest Clearance.

Statin Response. Evidence: 5/10. Source: PMID 18430057. Better HDL Response.

Clopidogrel Response. Evidence: 5/10. Source: PMID 21170047. Typical Response.

Showing effects for T/C genotype

Heart Disease. Evidence: 4/10. Source: PMID 24918121. Slightly Higher Risk.

Pesticide Sensitivity. Evidence: 3/10. Source: PMID 7916578. Faster Clearance.

Clopidogrel Response. Evidence: 5/10. Source: PMID 21170047. Intermediate Response.

What TT Genotype Means

What this genotype means for the people who carry it

Sample genotype: TT (Homozygous)

The presence of two T alleles produces the glutamine-containing form of the paraoxonase 1 enzyme [1]. This specific enzyme form binds stably to HDL particles, providing robust antioxidant defense that prevents LDL cholesterol from oxidizing and forming arterial plaques [2]. Consequently, multiple clinical studies have linked this genotype to a lower risk of coronary artery disease and subclinical atherosclerosis [3]. However, this version of the enzyme is less efficient at breaking down organophosphate pesticides and chemical nerve agents [4]. Additionally, some early research suggested that individuals with this genotype might have a reduced response to the blood thinner clopidogrel, although larger clinical trials have shown conflicting results regarding its overall impact on cardiovascular events [5].

Lower risk of coronary artery disease; Slower detoxification of organophosphate pesticides; Potentially reduced activation of clopidogrel.

What CC Genotype Means

Sample genotype: CC (Homozygous)

Possessing two copies of the C allele encodes the arginine-containing form of the paraoxonase 1 enzyme [1]. This version of the enzyme has a lower affinity for HDL particles and is less effective at preventing the oxidation of LDL cholesterol, which can accelerate plaque buildup in the arteries [2]. As a result, several studies have linked this genotype to an increased risk of coronary artery disease and ischemic stroke [3]. Conversely, the arginine-containing enzyme is highly efficient at hydrolyzing and neutralizing organophosphate pesticides and chemical toxins, offering superior protection against these specific environmental exposures [4]. Furthermore, individuals with this genotype have been shown to experience a significantly better HDL-cholesterol response when treated with the statin simvastatin [5].

Increased risk of coronary artery disease; Fastest detoxification of organophosphate pesticides; Enhanced HDL-cholesterol response to simvastatin.

What TC Genotype Means

Sample genotype: TC (Heterozygous)

A combination of one T allele and one C allele leads to a mixture of both glutamine- and arginine-containing paraoxonase 1 enzymes in the bloodstream [1]. Because the arginine-containing enzyme is less effective at preventing LDL cholesterol oxidation, this genotype is associated with a slightly higher risk of coronary artery disease and plaque buildup than the T/T genotype [2]. On the positive side, having one C allele provides a moderate increase in the ability to break down and detoxify organophosphate pesticides and environmental toxins compared to those with the T/T genotype [3]. In terms of medication response, some studies suggest a typical response to statins like simvastatin, while the clinical impact on clopidogrel responsiveness remains highly debated with mixed findings across different populations [4].

Slightly increased risk of coronary artery disease; Moderate detoxification of organophosphate pesticides; Typical response to statin therapy.

Related Variants

Variants with shared genetic architecture

rs854560 · PON1 Gene · Chr 7 · Cardiovascular Health

rs854572 · PON1 Gene · Chr 7 · Antioxidant Protection

rs705379 · PON1 Gene · Chr 7 · Paraoxonase Enzyme Activity

Sources

The molecular basis of the human serum paraoxonase activity polymorphism.

A variant of human paraoxonase/arylesterase (HUMPONA) gene is a risk factor for coronary artery disease.

Molecular basis for the polymorphic forms of human serum paraoxonase/arylesterase: glutamine or arginine at position 191, for the respective A or B allozymes.

Effect of statin therapy on plasma high-density lipoprotein-cholesterol levels is modified by paraoxonase 1 in Chinese patients with coronary heart disease.

Association between PON1 rs662 polymorphism and coronary artery disease.

Influence of the paraoxonase-1 Q192R genetic variant on clopidogrel responsiveness and recurrent cardiovascular events: a systematic review and meta-analysis.

Back to Variant Explorer

Content updated August 2026.

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