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rs6413432 (CYP2E1)

What you carry at this position in your DNA and what research says about it.

Drug Metabolism and Toxicity: 6/10 evidence, 11 publications.

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Sample genotype (not yours): T/T

Better Chemotherapy Survival and Typical Drug Toxicity Risk

This genotype is associated with increased survival rates when undergoing certain chemotherapy treatments. It also correlates with a typical, baseline risk of liver toxicity from common tuberculosis medications.

What this genotype means: Typical drug metabolism; Higher survival rates on cisplatin; Baseline risk of liver toxicity.

Sample genotype (not yours): A/A

Highest Drug Toxicity and Lower Chemotherapy Survival

Carrying two copies of the minor allele is linked to slower metabolism of isoniazid and a significantly higher risk of liver damage from tuberculosis treatments. It is also associated with reduced survival rates during cisplatin-based chemotherapy and increased paclitaxel side effects.

What this genotype means: Significantly slower drug clearance; Highest risk of drug-induced liver damage; Lower survival rates on cisplatin.

Sample genotype (not yours): T/A

Increased Drug Toxicity and Lower Chemotherapy Survival

Carrying one copy of the minor allele is linked to a higher risk of liver damage from tuberculosis medications. It is also associated with reduced survival rates during cisplatin-based chemotherapy and increased side effects from paclitaxel.

What this genotype means: Slower drug clearance; Elevated risk of drug-induced liver damage; Lower survival rates on cisplatin.

About CYP2E1

Gene function and biological role

Gene Function: The CYP2E1 gene encodes cytochrome P450 2E1, a key enzyme in the liver that metabolizes various foreign compounds, including drugs, toxins, and dietary carcinogens [1]. It plays a critical role in activating procarcinogens into highly reactive intermediates that can damage DNA [2]. Variations in this gene can significantly alter enzyme activity, leading to differences in how individuals process medications and clear environmental toxins [3]. This enzyme is also involved in the metabolism of alcohol and is a major source of cellular oxidative stress [4].

Variant Impact: This intron variant, also known as the DraI polymorphism, alters a thymine to an adenine in the CYP2E1 gene [3]. The change affects the regulation of the enzyme, influencing how rapidly certain medications are metabolized in the liver [5]. It has been widely studied for its impact on the efficacy and side effects of chemotherapy drugs [6]. Additionally, it serves as a genetic marker for susceptibility to liver injury when taking standard tuberculosis therapies [7].

Key Insight: This variant significantly impacts the risk of liver damage from standard tuberculosis treatments and influences survival outcomes during cisplatin-based chemotherapy.

Location: CYP2E1. Chromosome 10 · 10q26.3 · 133.5 Mb

Genotype Frequencies

Estimated prevalence by population

Global 80.7%; European 82.8%; African 84.4%; East Asian 55.7%; South Asian 66.9%; Americas 76.3%; Ashkenazi 82.0%; Finnish 76.8%; Middle Eastern 93.3%; Amish 83.2%.

Estimated TT genotype frequency.

Global 18.1%; European 16.4%; African 14.9%; East Asian 37.9%; South Asian 29.8%; Americas 22.1%; Ashkenazi 17.1%; Finnish 21.7%; Middle Eastern 6.6%; Amish 16.0%.

Estimated TA genotype frequency.

Global 1.2%; European 0.8%; African 0.7%; East Asian 6.4%; South Asian 3.3%; Americas 1.6%; Ashkenazi 0.9%; Finnish 1.5%; Middle Eastern 0.1%; Amish 0.8%.

Estimated AA genotype frequency.

Associated Traits

Showing effects for T/T genotype

Cancer & Oncology

Cancer Prognosis & Treatment Outcome

Chemotherapy Survival. Evidence: 5/10. Source: PMID 22188361. Increased Survival.

Pharmacogenomics

Antimicrobial & Antiviral Response

Isoniazid Toxicity. Evidence: 6/10. Source: PMID 16677176. Typical Risk.

Rifampin Toxicity. Evidence: 6/10. Source: PMID 16677176. Typical Risk.

Pyrazinamide Toxicity. Evidence: 6/10. Source: PMID 16677176. Typical Risk.

Chemotherapy Response

Paclitaxel Toxicity. Evidence: 5/10. Source: PMID 41148602. Typical Risk.

Showing effects for A/A genotype

Chemotherapy Survival. Evidence: 5/10. Source: PMID 22188361. Decreased Survival.

Isoniazid Toxicity. Evidence: 6/10. Source: PMID 16677176. Increased Risk.

Rifampin Toxicity. Evidence: 6/10. Source: PMID 16677176. Increased Risk.

Pyrazinamide Toxicity. Evidence: 6/10. Source: PMID 16677176. Increased Risk.

Paclitaxel Toxicity. Evidence: 5/10. Source: PMID 41148602. Increased Risk.

Showing effects for T/A genotype

What TT Genotype Means

What this genotype means for the people who carry it

Sample genotype: TT (Homozygous)

Standard enzymatic activity is maintained by this genotype, resulting in typical processing of many common medications [1]. When undergoing cisplatin-based chemotherapy, patients with this genotype exhibit significantly improved progression-free survival compared to those carrying the variant allele [2]. The risk of developing severe peripheral neuropathy or pain during paclitaxel treatment remains at the typical baseline level [3]. Similarly, the liver processes tuberculosis drugs like isoniazid, rifampin, and pyrazinamide at a normal rate [4]. This normal clearance rate helps prevent the toxic accumulation of drug metabolites, keeping the risk of drug-induced hepatitis low [5]. Overall, this genetic profile is highly favorable for standard chemotherapy outcomes and carries no elevated risk for drug-induced liver injury.

Typical drug metabolism; Higher survival rates on cisplatin; Baseline risk of liver toxicity.

What AA Genotype Means

Sample genotype: AA (Homozygous)

Slower drug clearance and altered metabolic pathways characterize this homozygous variant genotype [1]. Patients carrying two copies of the variant allele experience a significantly increased risk of liver toxicity when taking standard tuberculosis medications [2]. Isoniazid concentrations in the blood tend to be higher, which correlates with a greater likelihood of drug-induced hepatitis [3]. When undergoing chemotherapy with cisplatin or cyclophosphamide, this genotype is associated with reduced progression-free survival [4]. There is also a heightened susceptibility to paclitaxel-induced side effects, such as painful peripheral neuropathy [5]. These findings highlight the importance of personalized medicine and careful monitoring of liver health during intensive drug therapies.

Significantly slower drug clearance; Highest risk of drug-induced liver damage; Lower survival rates on cisplatin.

What TA Genotype Means

Sample genotype: TA (Heterozygous)

Enzymatic function is altered by carrying one copy of the variant allele, which can slow down the clearance of specific drugs [1]. During tuberculosis therapy with isoniazid, rifampin, or pyrazinamide, this slower metabolism is linked to a significantly higher risk of drug-induced liver damage [2]. The accumulation of toxic drug metabolites can lead to elevated liver enzymes and hepatitis [3]. When treated with cisplatin and cyclophosphamide for ovarian cancer, patients with this genotype show a decreased likelihood of progression-free survival [4]. Furthermore, paclitaxel chemotherapy is more likely to trigger adverse side effects, including severe neuropathy and pain [5]. Monitoring liver function and discussing alternative treatment regimens with a healthcare provider may be beneficial when these medications are prescribed.

Slower drug clearance; Elevated risk of drug-induced liver damage; Lower survival rates on cisplatin.

Related Variants

Variants with shared genetic architecture

rs2031920 · CYP2E1 Gene · Chr 10 · Tuberculosis Drug Liver Risk

rs3813867 · CYP2E1 Gene · Chr 10 · Liver Health and Cancer Risk

rs2070673 · CYP2E1 Gene · Chr 10 · Liver and Chemical Safety

Sources

Genotype and allele frequencies of polymorphic CYP2E1 in the Turkish population.

Genetic Polymorphisms of CYP2E1, GSTP1, NQO1 and MPO and the Risk of Nasopharyngeal Carcinoma in a Han Chinese Population of Southern China.

Frequencies of 23 functionally significant variant alleles related with metabolism of antineoplastic drugs in the chilean population: comparison with caucasian and asian populations.

A comparison of Val81Met and other polymorphisms of alcohol metabolising genes in patients and controls in Northern Spain.

Effect of NAT2, GSTM1 and CYP2E1 genetic polymorphisms on plasma concentration of isoniazid and its metabolites in patients with tuberculosis, and the assessment of exposure-response relationships.

Pharmacogenomics of cisplatin-based chemotherapy in ovarian cancer patients of different ethnic origins.

Predisposition of antituberculosis drug induced hepatotoxicity by cytochrome P450 2E1 genotype and haplotype in pediatric patients.

CYP2D6 and CYP2E1 Gene Polymorphisms and Their Influence on Chemotherapy Treatment Outcome and Toxicity in Breast Cancer Patients.

Role of polymorphic N-acetyl transferase2 and cytochrome P4502E1 gene in antituberculosis treatment-induced hepatitis.

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Content updated August 2026.

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