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rs440446 (APOE)

What you carry at this position in your DNA and what research says about it.

Alzheimer's Disease Risk: 8/10 evidence, 16 publications.

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Sample genotype (not yours): C/C

Typical Alzheimer's Risk and Better Cognitive Performance

Inheriting two copies of the protective C allele is linked to a lower risk of cognitive decline. This genotype is also associated with healthier triglyceride profiles.

What this genotype means: Lower risk of late-onset Alzheimer's disease; Better cognitive performance in older age; Favorable blood triglyceride levels.

Sample genotype (not yours): C/G

Moderately Increased Risk of Alzheimer's Disease

Carrying one copy of the G risk allele is associated with a moderate increase in the risk of cognitive decline. It also correlates with slightly higher triglyceride levels.

What this genotype means: Moderately elevated risk of late-onset Alzheimer's; Potential for slightly faster memory decline in older age; Slightly higher circulating triglyceride levels.

Sample genotype (not yours): G/G

Higher Risk of Alzheimer's Disease and Cognitive Decline

Two copies of the G allele are linked to a significantly higher risk of Alzheimer's disease. This genotype is also associated with poorer late-life cognitive function and elevated triglycerides.

What this genotype means: Significantly higher risk of late-onset Alzheimer's disease; Increased rate of cognitive and memory decline in later life; Elevated blood triglyceride levels.

About APOE

Gene function and biological role

Gene Function: The APOE gene encodes apolipoprotein E, a major cholesterol-carrying protein in the brain and peripheral tissues [1]. It plays a critical role in lipid transport, cellular repair, and the clearance of amyloid-beta plaques [2]. Variations in this gene are the most significant genetic risk factors for late-onset Alzheimer's disease [3]. Beyond neurodegenerative risk, APOE is heavily involved in cardiovascular health and lipid metabolism [4].

Variant Impact: Located in the first intron of the APOE gene, rs440446 is a common single nucleotide variant also known as the IVS1+69 or +113G/C polymorphism [5]. Although it does not directly alter the amino acid sequence of the main apolipoprotein E protein, it resides in an enhancer region and is thought to influence transcriptional efficiency [1]. This variant is in strong linkage disequilibrium with the well-known APOE epsilon alleles, meaning it is frequently inherited alongside them and serves as a strong proxy for Alzheimer's risk [2]. It is also associated with differences in cognitive performance and circulating lipid levels [6].

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Key Insight: This variant is located in an intron but acts as a powerful genetic proxy for the APOE epsilon 4 risk state. The G allele is strongly linked to higher Alzheimer's risk, while the C allele is protective.

Location: APOE. Chromosome 19 · 19q13.32 · 44.9 Mb

Genotype Frequencies

Estimated prevalence by population

Global 11.1%; European 13.1%; African 2.0%; East Asian 35.0%; South Asian 22.9%; Americas 16.8%; Ashkenazi 14.3%; Finnish 7.0%; Middle Eastern 23.0%; Amish 9.2%.

Estimated CC genotype frequency.

Global 40.1%; European 46.2%; African 24.5%; East Asian 48.3%; South Asian 49.9%; Americas 48.4%; Ashkenazi 47.0%; Finnish 39.0%; Middle Eastern 49.9%; Amish 42.3%.

Estimated CG genotype frequency.

Global 48.7%; European 40.7%; African 73.5%; East Asian 16.7%; South Asian 27.1%; Americas 34.9%; Ashkenazi 38.7%; Finnish 53.9%; Middle Eastern 27.1%; Amish 48.5%.

Estimated GG genotype frequency.

Associated Traits

Showing effects for C/C genotype

Neurology & Mental Health

Neurodegenerative Diseases

Alzheimer's Disease. Evidence: 8/10. Source: PMID 30979435. Typical Risk.

Cognitive Performance

Cognitive Function. Evidence: 6/10. Source: PMID 40374629. Better Function.

Cardiovascular & Metabolic

Lipids & Cholesterol

Triglycerides. Evidence: 4/10. Source: PMID 37821706. Typical Levels.

Blood Cell & Iron Traits

Eosinophil Count. Evidence: 7/10. Source: PMID 30595370. Higher Count.

Showing effects for C/G genotype

Alzheimer's Disease. Evidence: 8/10. Source: PMID 30979435. Increased Risk.

Cognitive Function. Evidence: 6/10. Source: PMID 40374629. Typical.

Triglycerides. Evidence: 4/10. Source: PMID 37821706. Slightly Elevated.

Eosinophil Count. Evidence: 7/10. Source: PMID 30595370. Typical.

Showing effects for G/G genotype

Alzheimer's Disease. Evidence: 8/10. Source: PMID 30979435. ~1.6x Higher Risk.

Cognitive Function. Evidence: 6/10. Source: PMID 40374629. Poorer Function.

Triglycerides. Evidence: 4/10. Source: PMID 37821706. Elevated Levels.

What CC Genotype Means

What this genotype means for the people who carry it

Sample genotype: CC (Homozygous)

A double dose of the C allele is highly protective against late-onset neurodegenerative conditions. Large-scale genomic studies demonstrate that this genotype is associated with a significantly lower risk of developing Alzheimer's disease compared to G allele carriers [1]. Cognitive assessments in older cohorts show that this genetic profile supports better overall cognitive function and memory performance in later life [2]. Lipid metabolism is also optimized, with studies indicating lower circulating triglyceride levels [3]. Additionally, some research suggests a slight elevation in eosinophil counts, though this remains within normal physiological ranges [4].

Lower risk of late-onset Alzheimer's disease; Better cognitive performance in older age; Favorable blood triglyceride levels.

What CG Genotype Means

Sample genotype: CG (Heterozygous)

Possessing one copy of the G allele introduces a moderate genetic predisposition to cognitive decline. Research indicates that this heterozygous state elevates the risk of late-onset Alzheimer's disease compared to the protective C/C genotype [1]. This risk is largely driven by the strong linkage between the G allele and the APOE epsilon 4 isoform [2]. While cognitive performance in mid-life remains typical, older age may bring a slightly faster rate of memory decline [3]. Metabolic profiles may also show a mild elevation in circulating triglycerides, requiring standard cardiovascular monitoring [4].

Moderately elevated risk of late-onset Alzheimer's; Potential for slightly faster memory decline in older age; Slightly higher circulating triglyceride levels.

What GG Genotype Means

Sample genotype: GG (Homozygous)

Carrying two copies of the G allele represents a notable genetic risk factor for neurodegenerative disease. Multiple genome-wide association studies confirm a strong link between this genotype and an increased risk of late-onset Alzheimer's disease [1]. This association is primarily a consequence of the variant's tight genetic linkage to the high-risk APOE epsilon 4 allele [2]. Longitudinal studies of older adults show a more pronounced decline in memory and general cognitive performance over time [3]. Furthermore, metabolic assessments show a clear association with elevated blood triglyceride levels, which can impact overall cardiovascular health [4].

Significantly higher risk of late-onset Alzheimer's disease; Increased rate of cognitive and memory decline in later life; Elevated blood triglyceride levels.

Related Variants

Variants with shared genetic architecture

rs429358 · APOE Gene · Chr 19 · Alzheimer's Disease Risk

rs7412 · APOE Gene · Chr 19 · Cholesterol and Heart Risk

rs769449 · APOE Gene · Chr 19 · Alzheimer's Disease Risk

Sources

APOE genotype-function relationship: evidence of -491 A/T promoter polymorphism modifying transcription control but not type 2 diabetes risk.

Similar Genetic Architecture of Alzheimer's Disease and Differential APOE Effect Between Sexes.

Identification of genetic heterogeneity of Alzheimer's disease across age.

Genetic determinants of serum lipid levels in Chinese subjects: a population-based study in Shanghai, China.

The APOE -219G/T and +113G/C polymorphisms affect insulin resistance among Turks.

Mexican Biobank advances population and medical genomics of diverse ancestries.

Combining cross-sectional and longitudinal genomic approaches to identify determinants of cognitive and physical decline.

Leveraging Polygenic Functional Enrichment to Improve GWAS Power.

Sex-specific genetic architecture of late-life memory performance.

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Content updated August 2026.

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