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rs3850625 (CACNA1S)

What you carry at this position in your DNA and what research says about it.

Muscle and Kidney Function: 9/10 evidence, 24 publications.

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Sample genotype (not yours): G/G

Higher Muscle Mass and Stronger Lung Function

This genotype is linked to greater physical strength, higher lean muscle tissue, and robust lung capacity.

What this genotype means: Greater lean muscle mass; Stronger physical grip strength; Higher respiratory vital capacity.

Sample genotype (not yours): A/A

Higher Kidney Filtration but Lower Muscle Mass

This genotype presents a trade-off, featuring enhanced kidney filtration alongside lower muscle mass and lung capacity.

What this genotype means: Enhanced kidney filtration rate; Lower lean muscle mass and grip strength; Slightly higher tendency for abdominal fat.

Sample genotype (not yours): G/A

Typical Muscle Mass and Kidney Function

This genotype represents a balanced genetic profile with typical muscle strength and standard kidney filtration rates.

What this genotype means: Standard muscle mass and grip strength; Typical respiratory capacity; Normal kidney filtration rates.

About CACNA1S

Gene function and biological role

Gene Function: The CACNA1S gene encodes the alpha-1S subunit of the dihydropyridine receptor, a critical voltage-gated calcium channel in skeletal muscle [1]. This protein acts as a voltage sensor, translating electrical signals from the nervous system into physical muscle contraction [1]. Proper functioning of this channel is essential for maintaining muscle tone, strength, and overall excitation-contraction coupling [2]. Variants in this gene are historically studied for their roles in rare muscle-weakness disorders and sensitivity to certain anesthetics [1]. However, common variations in CACNA1S also influence everyday physical traits like muscle volume and grip strength across the general population [2].

Variant Impact: The rs3850625 variant is a missense mutation in the CACNA1S gene that alters the encoded protein sequence [3]. Specifically, it causes an amino acid substitution where arginine is replaced by cysteine at position 1539 of the calcium channel subunit [3]. This structural alteration is located in a key functional domain of the channel, subtly modifying how calcium ions flow during muscle activation [3]. While ClinVar database submissions confirm this specific change is benign and does not cause severe genetic myopathies, it acts as a genetic dial for systemic traits [3]. Through its influence on calcium signaling, the variant impacts muscle development, lung capacity, and metabolic markers like kidney filtration [4].

Read on the Thigh Muscle Volume page

Key Insight: This single genetic change acts as a biological trade-off, balancing physical muscle performance and lung capacity against the rate at which the kidneys filter waste.

Location: CACNA1S. Chromosome 1 · 1q32.1 · 201.0 Mb

Genotype Frequencies

Estimated prevalence by population

Global 83.0%; European 77.4%; African 95.8%; East Asian 92.8%; South Asian 65.1%; Americas 84.5%; Ashkenazi 82.5%; Finnish 72.6%; Middle Eastern 90.7%; Amish 54.5%.

Estimated GG genotype frequency.

Global 15.9%; European 21.2%; African 4.2%; East Asian 7.1%; South Asian 31.2%; Americas 14.8%; Ashkenazi 16.6%; Finnish 25.2%; Middle Eastern 9.1%; Amish 38.6%.

Estimated GA genotype frequency.

Global 1.1%; European 1.4%; African < 0.1%; East Asian 0.1%; South Asian 3.7%; Americas 0.6%; Ashkenazi 0.8%; Finnish 2.2%; Middle Eastern 0.2%; Amish 6.8%.

Estimated AA genotype frequency.

Associated Traits

Showing effects for G/G genotype

Organ Systems

Kidney Function & Disease

Kidney Function. Evidence: 9/10. Source: PMID 26831199. Typical.

Respiratory Health

Lung Function. Evidence: 8/10. Source: PMID 30595370. Higher Capacity.

Lifestyle, Fitness & Aging

Muscle Strength & Power

Muscle Strength. Evidence: 9/10. Source: PMID 33097823. Higher.

Cardiovascular & Metabolic

Obesity & Body Composition

Abdominal Fat. Evidence: 6/10. Source: PMID 35773277. Lower.

Showing effects for A/A genotype

Kidney Function. Evidence: 9/10. Source: PMID 26831199. ~0.66 mL/min Higher.

Lung Function. Evidence: 8/10. Source: PMID 30595370. Lower Capacity.

Muscle Strength. Evidence: 9/10. Source: PMID 33097823. Lower.

Abdominal Fat. Evidence: 6/10. Source: PMID 35773277. Higher.

Showing effects for G/A genotype

Kidney Function. Evidence: 9/10. Source: PMID 26831199. Slightly Higher.

Lung Function. Evidence: 8/10. Source: PMID 30595370. Typical.

Muscle Strength. Evidence: 9/10. Source: PMID 33097823. Typical.

Abdominal Fat. Evidence: 6/10. Source: PMID 35773277. Typical.

What GG Genotype Means

What this genotype means for the people who carry it

Sample genotype: GG (Homozygous)

Having two copies of the G allele is associated with optimal calcium channel function in skeletal muscle tissue. Large-scale genomic studies show that this translates to higher overall grip strength and increased thigh muscle volume [1]. Individuals with this profile also tend to exhibit greater vital capacity, indicating stronger lung function and respiratory muscle efficiency [2]. On the metabolic side, this genotype is linked to lower levels of abdominal fat accumulation [3]. While kidney filtration rates are typical rather than elevated, overall physical and respiratory metrics are highly favorable [4].

Greater lean muscle mass; Stronger physical grip strength; Higher respiratory vital capacity.

What AA Genotype Means

Sample genotype: AA (Homozygous)

Having two copies of the A allele alters calcium channel dynamics, leading to a distinct physiological trade-off. On the positive side, this profile is associated with a significantly higher estimated glomerular filtration rate, indicating efficient kidney function [1]. However, this comes with a tendency toward lower lean muscle mass, reduced thigh muscle volume, and weaker grip strength [2]. Lung function parameters, such as vital capacity, also tend to be lower compared to other genotypes [3]. Additionally, studies link this genetic profile to a higher accumulation of abdominal fat and a slightly increased susceptibility to skeletal variations [4].

Enhanced kidney filtration rate; Lower lean muscle mass and grip strength; Slightly higher tendency for abdominal fat.

What GA Genotype Means

Sample genotype: GA (Heterozygous)

Carrying one G allele and one A allele results in an intermediate physical and metabolic profile. Calcium signaling in skeletal muscles operates at a standard baseline, supporting typical muscle mass and grip strength [1]. Lung capacity and respiratory vital capacity also fall within the normal, expected range for the population [2]. On the metabolic front, kidney filtration rates are slightly higher than the baseline but remain thoroughly typical [3]. There are no elevated risks for skeletal abnormalities or unusual abdominal fat accumulation associated with this balanced genetic makeup [4].

Standard muscle mass and grip strength; Typical respiratory capacity; Normal kidney filtration rates.

Related Variants

Variants with shared genetic architecture

rs28930069 · CACNA1S Gene · Chr 1 · Periodic Paralysis Risk

rs80338777 · CACNA1S Gene · Chr 1 · Periodic Paralysis Risk

rs12258967 · CACNB2 Gene · Chr 10 · Blood Pressure

Sources

The link between liver fat and cardiometabolic diseases is highlighted by genome-wide association study of MRI-derived measures of body composition.

Combining cross-sectional and longitudinal genomic approaches to identify determinants of cognitive and physical decline.

A scalable variational inference approach for increased mixed-model association power.

Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk.

Inherited basis of visceral, abdominal subcutaneous and gluteofemoral fat depots.

Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function.

Discovery and prioritization of variants and genes for kidney function in &gt;1.2 million individuals.

The genetic architecture of appendicular lean mass characterized by association analysis in the UK Biobank study.

A catalog of genetic loci associated with kidney function from analyses of a million individuals.

Back to Variant Explorer

Content updated August 2026.

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