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rs2242480 (CYP3A4)

What you carry at this position in your DNA and what research says about it.

Drug Metabolism and Heart Risk: 8/10 evidence, 35 publications.

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Sample genotype (not yours): C/C

Typical Drug Metabolism and Baseline Heart Risk

Typical enzyme activity ensures standard processing of many common medications. Baseline susceptibility to cardiovascular conditions is maintained.

What this genotype means: Standard processing of common medications; Baseline risk for coronary heart disease.

Sample genotype (not yours): C/T

Altered Drug Clearance and Elevated Heart Risk

Faster clearance of some medications may reduce their effectiveness, while slower clearance of others increases sensitivity. An elevated risk of coronary heart disease is also associated with this genotype.

What this genotype means: Altered response to specific medications; Increased risk of coronary heart disease.

Sample genotype (not yours): T/T

Significantly Altered Drug Response and Higher Heart Risk

Slower metabolism of pain medications increases the risk of side effects, while faster clearance of immunosuppressants may reduce efficacy. A significantly higher risk of coronary heart disease is also linked to this genotype.

What this genotype means: Altered response to specific medications; Significantly increased risk of coronary heart disease.

About CYP3A4

Gene function and biological role

Gene Function: Cytochrome P450 3A4, encoded by the CYP3A4 gene, is one of the most important drug-metabolizing enzymes in the human body [1]. It is primarily expressed in the liver and intestines, where it processes more than half of all clinically prescribed medications [2]. These include common therapeutics such as immunosuppressants, statins, and opioid pain relievers [3]. Variations in this gene can significantly alter how quickly these substances are cleared from the system [4]. Consequently, genetic differences in CYP3A4 can lead to unexpected drug toxicities or treatment failures [5].

Variant Impact: The rs2242480 variant is an intronic single nucleotide polymorphism located in the CYP3A4 gene [2]. This genetic change, historically referred to as the CYP3A4*1G or CYP3A4*36 allele, alters the expression and baseline activity of the CYP3A4 enzyme [1]. It is highly prevalent in East Asian populations, where it frequently co-inherits with other cytochrome P450 variants [6]. Because it modifies enzyme levels, this variant directly impacts the pharmacokinetics of various medications [4]. It has also been linked to differences in susceptibility to certain cardiovascular conditions [7].

Key Insight: This variant acts like a double-edged sword for medications, speeding up the clearance of some drugs while slowing down others, and it is also linked to cardiovascular health.

Location: CYP3A4. Chromosome 7 · 7q22.1 · 99.8 Mb

Genotype Frequencies

Estimated prevalence by population

Global 55.1%; European 82.1%; African 7.1%; East Asian 53.8%; South Asian 42.8%; Americas 41.1%; Ashkenazi 79.7%; Finnish 85.1%; Middle Eastern 63.1%; Amish 86.2%.

Estimated CC genotype frequency.

Global 27.7%; European 17.0%; African 39.2%; East Asian 39.1%; South Asian 45.2%; Americas 46.0%; Ashkenazi 19.2%; Finnish 14.3%; Middle Eastern 32.7%; Amish 13.2%.

Estimated CT genotype frequency.

Global 17.2%; European 0.9%; African 53.7%; East Asian 7.1%; South Asian 11.9%; Americas 12.9%; Ashkenazi 1.2%; Finnish 0.6%; Middle Eastern 4.2%; Amish 0.5%.

Estimated TT genotype frequency.

Associated Traits

Showing effects for C/C genotype

Pharmacogenomics

Immunosuppressant & Biologic Response

Tacrolimus Clearance. Evidence: 8/10. Source: PMID 23459029. Typical Clearance.

Pain Medication Response

Fentanyl Sensitivity. Evidence: 8/10. Source: PMID 21535061. Typical Sensitivity.

Methadone Side Effects. Evidence: 5/10. Source: PMID 21902501. Typical Severity.

Cardiovascular & Metabolic

Heart Disease

Heart Disease. Evidence: 3/10. Source: PMID 21199372. Typical Risk.

Showing effects for C/T genotype

Tacrolimus Clearance. Evidence: 8/10. Source: PMID 23459029. Faster Clearance.

Fentanyl Sensitivity. Evidence: 8/10. Source: PMID 21535061. Higher Sensitivity.

Methadone Side Effects. Evidence: 5/10. Source: PMID 21902501. Increased Severity.

Heart Disease. Evidence: 3/10. Source: PMID 21199372. Elevated Risk.

Showing effects for T/T genotype

What CC Genotype Means

What this genotype means for the people who carry it

Sample genotype: CC (Homozygous)

Standard enzyme levels allow for the expected clearance of medications like tacrolimus and fentanyl [1] [2]. Standard dosing guidelines typically apply without genetic adjustments [3]. Baseline susceptibility to coronary heart disease is maintained, showing no elevated genetic risk from this specific locus [4]. Standard responses to pain management therapies are generally observed [5]. No increased risk of severe side effects or withdrawal during methadone therapy is associated with this genotype [6].

Standard processing of common medications; Baseline risk for coronary heart disease.

What CT Genotype Means

Sample genotype: CT (Heterozygous)

Accelerated clearance of the immunosuppressant tacrolimus may lead to lower blood concentrations of the drug [1]. Conversely, slower metabolism of fentanyl can increase sensitivity, meaning lower doses may be sufficient for pain control [2] [3]. An increased risk of coronary heart disease has been observed in carriers of this variant allele [4]. Higher susceptibility to severe side effects and withdrawal symptoms during methadone maintenance therapy is also reported [5]. Close clinical monitoring is often helpful when initiating therapies metabolized by this pathway [6].

Altered response to specific medications; Increased risk of coronary heart disease.

What TT Genotype Means

Sample genotype: TT (Homozygous)

Slower metabolism of fentanyl and related opioids can lead to higher drug concentrations and a greater risk of adverse effects like reduced breathing [1] [2]. Conversely, rapid clearance of tacrolimus often necessitates higher initial doses to maintain therapeutic levels [3]. A significantly elevated risk of coronary heart disease, with odds ratios up to nearly four-fold, has been documented [4]. Increased severity of side effects and withdrawal symptoms during methadone therapy is also a known risk [5]. These metabolic differences highlight the utility of genotype-guided dosing for specific medications [6].

Altered response to specific medications; Significantly increased risk of coronary heart disease.

Related Variants

Variants with shared genetic architecture

rs35599367 · CYP3A4 Gene · Chr 7 · Medication Clearance Rate

rs2740574 · CYP3A4 Gene · Chr 7 · Prostate Cancer Risk

rs4646437 · CYP3A4 Gene · Chr 7 · Drug Metabolism and Health

Sources

CYP3A4*1G genetic polymorphism influences CYP3A activity and response to fentanyl in Chinese gynecologic patients.

Analysis of 50 SNPs in CYP2D6, CYP2C19, CYP2C9, CYP3A4 and CYP1A2 by MALDI-TOF mass spectrometry in Chinese Han population.

Effect of CYP3A4*1G on the fentanyl consumption for intravenous patient-controlled analgesia after total abdominal hysterectomy in Chinese Han population.

Impact of CYP3A4*1G polymorphism on metabolism of fentanyl in Chinese patients undergoing lower abdominal surgery.

Genetic polymorphisms in CYP3A4 are associated with withdrawal symptoms and adverse reactions in methadone maintenance patients.

Influence of CYP3A5*3 polymorphism and interaction between CYP3A5*3 and CYP3A4*1G polymorphisms on post-operative fentanyl analgesia in Chinese patients undergoing gynaecological surgery.

A functional polymorphism in the CYP3A4 gene is associated with increased risk of coronary heart disease in the Chinese Han population.

Effects of CYP3A4 and CYP3A5 polymorphisms on tacrolimus pharmacokinetics in Chinese adult renal transplant recipients: a population pharmacokinetic analysis.

Impact of the CYP3A4*1G polymorphism and its combination with CYP3A5 genotypes on tacrolimus pharmacokinetics in renal transplant patients.

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Content updated August 2026.

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