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rs1801265 (DPYD)

What you carry at this position in your DNA and what research says about it.

Chemotherapy Toxicity: 6/10 evidence, 20 publications.

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Sample genotype (not yours): A/A

Typical Chemotherapy Toxicity Risk

Standard dihydropyrimidine dehydrogenase enzyme activity supports normal clearance of fluoropyrimidine chemotherapy drugs. This genotype is associated with a lower risk of severe side effects during standard treatments.

What this genotype means: Normal chemotherapy clearance; Lower risk of severe drug toxicity.

Sample genotype (not yours): A/G

Increased Chemotherapy Toxicity Risk

Presence of a single G variant allele is associated with a higher risk of severe side effects from certain chemotherapy drugs. These side effects can include severe diarrhea, hand-foot syndrome, and nerve damage.

What this genotype means: Elevated risk of chemotherapy side effects; Potential for slower drug clearance.

Sample genotype (not yours): G/G

Higher Chemotherapy Toxicity Risk

Possessing two copies of the G variant is linked to slower metabolism of fluoropyrimidine chemotherapy drugs. This can significantly increase the risk of severe toxicities, including hand-foot syndrome and infections.

What this genotype means: Slower chemotherapy metabolism; Significantly higher risk of drug toxicity.

About DPYD

Gene function and biological role

Gene Function: The DPYD gene encodes dihydropyrimidine dehydrogenase, an enzyme responsible for breaking down pyrimidines in the body [1]. This enzyme performs the rate-limiting step in clearing fluoropyrimidine chemotherapy drugs like 5-fluorouracil and capecitabine [1]. When dihydropyrimidine dehydrogenase activity is reduced, these chemotherapy medications can accumulate to toxic levels [2]. This accumulation can lead to severe, potentially life-threatening side effects during cancer treatment [2].

Variant Impact: Known also as DPYD*9A or C29R, this genetic change alters the amino acid cysteine to arginine at position 29 of the dihydropyrimidine dehydrogenase enzyme [3]. This specific alteration has been widely studied for its impact on enzyme activity and drug clearance [4]. While some clinical guidelines classify it as having normal function, several studies suggest it may alter sensitivity to chemotherapy [4]. The G allele is relatively common across many populations, particularly in those of African and European ancestry.

Key Insight: Although some clinical databases classify this variant as normal, multiple clinical trials have linked it to a higher rate of severe chemotherapy side effects like hand-foot syndrome and neuropathy.

Location: DPYD. Chromosome 1 · 1p21.3 · 97.9 Mb

Genotype Frequencies

Estimated prevalence by population

Global 53.6%; European 60.0%; African 35.5%; East Asian 86.1%; South Asian 56.7%; Americas 56.6%; Ashkenazi 79.1%; Finnish 51.5%; Middle Eastern 60.7%; Amish 60.8%.

Estimated AA genotype frequency.

Global 38.2%; European 34.9%; African 48.2%; East Asian 13.3%; South Asian 37.2%; Americas 37.3%; Ashkenazi 19.7%; Finnish 40.5%; Middle Eastern 34.4%; Amish 34.4%.

Estimated AG genotype frequency.

Global 8.3%; European 5.1%; African 16.3%; East Asian 0.5%; South Asian 6.1%; Americas 6.1%; Ashkenazi 1.2%; Finnish 8.0%; Middle Eastern 4.9%; Amish 4.9%.

Estimated GG genotype frequency.

Associated Traits

Showing effects for A/A genotype

Pharmacogenomics

Chemotherapy Response

Chemotherapy Toxicity. Evidence: 6/10. Source: PMID 30114658. Lower Risk.

Cardiovascular & Metabolic

Obesity & Body Composition

Body Mass Index. Evidence: 8/10. Source: PMID 29273807. Typical BMI.

Showing effects for A/G genotype

Chemotherapy Toxicity. Evidence: 6/10. Source: PMID 30114658. Increased Risk.

Body Mass Index. Evidence: 8/10. Source: PMID 29273807. Slightly Higher BMI.

Showing effects for G/G genotype

Chemotherapy Toxicity. Evidence: 6/10. Source: PMID 30114658. Higher Risk.

What AA Genotype Means

What this genotype means for the people who carry it

Sample genotype: AA (Homozygous)

Standard dihydropyrimidine dehydrogenase enzyme activity supports normal clearance of fluoropyrimidine chemotherapy drugs [1]. This genotype is associated with a lower risk of severe side effects during standard treatments [1]. Clinical studies show that carrying two copies of the standard A allele is linked to a decreased risk of drug toxicity compared to carrying the variant G allele [2]. Patients with this genotype typically experience standard drug metabolism and survival rates when undergoing common chemotherapy regimens like FOLFOX or XELOX [3]. No dosage adjustments are generally recommended based on this variant alone.

Normal chemotherapy clearance; Lower risk of severe drug toxicity.

What AG Genotype Means

Sample genotype: AG (Heterozygous)

Presence of a single G variant allele is associated with a higher risk of severe side effects from certain chemotherapy drugs [1]. These side effects can include severe diarrhea, hand-foot syndrome, and nerve damage [2]. Some clinical studies have observed decreased survival rates and increased neuropathy in patients treated with regimens like FOLFOX or XELOX [3]. While some professional guidelines classify this variant as having normal function, other research suggests it may cause partial enzyme impairment under certain conditions [1]. Discussing these genetic findings with an oncology team can help guide personalized treatment monitoring.

Elevated risk of chemotherapy side effects; Potential for slower drug clearance.

What GG Genotype Means

Sample genotype: GG (Homozygous)

Possessing two copies of the G variant is linked to slower metabolism of fluoropyrimidine chemotherapy drugs [1]. This can significantly increase the risk of severe toxicities, including hand-foot syndrome and infections [2]. Clinical trials have reported increased rates of gastrointestinal toxicity, neuropathy, and decreased overall survival in patients undergoing standard chemotherapy [3]. Although some major guidelines do not mandate dose reductions for this specific variant, clinical evidence suggests a higher susceptibility to adverse drug reactions [1]. Sharing these results with healthcare providers allows for closer monitoring during cancer therapies.

Slower chemotherapy metabolism; Significantly higher risk of drug toxicity.

Related Variants

Variants with shared genetic architecture

rs56038477 · DPYD Gene · Chr 1 · Chemotherapy Toxicity Risk

rs75017182 · DPYD Gene · Chr 1 · Chemotherapy Drug Toxicity

rs17376848 · DPYD Gene · Chr 1 · Chemotherapy Toxicity Risk

Sources

Genotype-phenotype correlations in 5-fluorouracil metabolism: a candidate DPYD haplotype to improve toxicity prediction.

Pharmacogenetic analyses of 2183 patients with advanced colorectal cancer; potential role for common dihydropyrimidine dehydrogenase variants in toxicity to chemotherapy.

Dihydropyrimidine dehydrogenase (DPD) deficiency: identification and expression of missense mutations C29R, R886H and R235W.

Germline pharmacogenomics of DPYD*9A (c.85T>C) variant in patients with gastrointestinal malignancies treated with fluoropyrimidines.

Genetic Polymorphisms and Tumoral Mutational Profiles over Survival in Advanced Colorectal Cancer Patients: An Exploratory Study.

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Content updated August 2026.

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