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rs1799853 (CYP2C9)

What you carry at this position in your DNA and what research says about it.

Medication Sensitivity: 9/10 evidence, 33 publications.

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Sample genotype (not yours): C/C

Typical Medication Metabolism

Normal CYP2C9 enzyme activity allows for standard processing of many common medications. There is no genetically increased risk of side effects from warfarin or NSAIDs.

What this genotype means: Normal clearance of warfarin and NSAIDs; Standard drug dosing applies.

Sample genotype (not yours): C/T

Slightly Slower Medication Metabolism

One copy of the variant reduces CYP2C9 enzyme activity, slowing down the clearance of blood thinners and NSAIDs. This can increase the risk of side effects like bleeding.

What this genotype means: Increased sensitivity to warfarin; Slightly higher risk of NSAID-related GI bleeding.

Sample genotype (not yours): T/T

Significantly Slower Medication Metabolism

Two copies of the variant significantly reduce CYP2C9 enzyme activity, leading to slow clearance of several common drugs. This markedly increases the risk of drug toxicity and bleeding.

What this genotype means: High sensitivity to warfarin and NSAIDs; Increased risk of drug-induced side effects.

About CYP2C9

Gene function and biological role

Gene Function: The CYP2C9 gene encodes an enzyme that is a major member of the cytochrome P450 superfamily [1]. This enzyme plays a critical role in the liver by metabolizing many clinically important drugs, including anticoagulants, nonsteroidal anti-inflammatory drugs, and anticonvulsants [1]. Variations in this gene can significantly alter how quickly or slowly these medications are cleared from the body [2]. When enzyme activity is altered, standard drug doses can become ineffective or toxic [2].

Variant Impact: The rs1799853 variant, commonly known as the CYP2C9*2 allele, is a missense mutation that changes the amino acid arginine to cysteine at position 144 of the enzyme [3]. This specific structural change reduces the enzyme's catalytic activity, leading to a decreased ability to metabolize substrate drugs [3]. Because the enzyme processes medications more slowly, drugs can accumulate in the bloodstream [2]. This slow clearance significantly increases the risk of drug-related side effects and toxicity [2].

Key Insight: This variant reduces the liver's ability to clear common pain relievers like ibuprofen, which can unexpectedly increase the risk of stomach irritation and bleeding.

Location: CYP2C9. Chromosome 10 · 10q23.33 · 94.9 Mb

Genotype Frequencies

Estimated prevalence by population

Global 83.4%; European 76.3%; African 95.4%; East Asian 99.9%; South Asian 92.4%; Americas 81.4%; Ashkenazi 74.8%; Finnish 77.8%; Middle Eastern 74.0%; Amish 71.8%.

Estimated CC genotype frequency.

Global 15.6%; European 22.1%; African 4.6%; East Asian 0.1%; South Asian 7.5%; Americas 17.6%; Ashkenazi 23.4%; Finnish 20.8%; Middle Eastern 24.0%; Amish 25.8%.

Estimated CT genotype frequency.

Global 1.0%; European 1.6%; African 0.1%; East Asian < 0.1%; South Asian 0.2%; Americas 1.0%; Ashkenazi 1.8%; Finnish 1.4%; Middle Eastern 1.9%; Amish 2.3%.

Estimated TT genotype frequency.

Associated Traits

Showing effects for C/C genotype

Pharmacogenomics

Anticoagulant & Blood Thinner Response

Warfarin Sensitivity. Evidence: 9/10. Source: PMID 19300499. Typical Metabolism.

Adverse Drug Reactions

NSAID Bleeding Risk. Evidence: 3/10. Source: PMID 19422321. Typical Risk.

Cardiovascular Drug Response

Blood Pressure Drug Response. Evidence: 8/10. Source: PMID 12359989. Typical Response.

Cardiovascular & Metabolic

Coagulation & Clotting

Blood Clot Risk. Evidence: 5/10. Source: PMID 28750087. Typical Risk.

Showing effects for C/T genotype

Warfarin Sensitivity. Evidence: 9/10. Source: PMID 19300499. ~20% Slower Clearance.

NSAID Bleeding Risk. Evidence: 3/10. Source: PMID 19422321. Increased Risk.

Blood Pressure Drug Response. Evidence: 8/10. Source: PMID 12359989. Stronger Response.

Blood Clot Risk. Evidence: 5/10. Source: PMID 28750087. Increased Risk.

Showing effects for T/T genotype

Warfarin Sensitivity. Evidence: 9/10. Source: PMID 19300499. ~40% Slower Clearance.

NSAID Bleeding Risk. Evidence: 3/10. Source: PMID 19422321. Higher Risk.

What CC Genotype Means

What this genotype means for the people who carry it

Sample genotype: CC (Homozygous)

Standard genetic makeup at this position results in fully functional CYP2C9 enzymes [1]. Medications such as the blood thinner warfarin and common NSAIDs like ibuprofen are metabolized at a normal rate [1]. This means standard dosing guidelines are typically appropriate, and there is no elevated genetic risk of gastrointestinal bleeding from these drugs [2]. Additionally, response to blood pressure medications like irbesartan and oral contraceptives is expected to be typical [3] [4].

Normal clearance of warfarin and NSAIDs; Standard drug dosing applies.

What CT Genotype Means

Sample genotype: CT (Heterozygous)

One copy of the T allele reduces CYP2C9 enzyme activity by approximately 20% [1]. This slower clearance means medications like warfarin remain in the bloodstream longer, increasing sensitivity and the risk of bleeding [1]. Common pain relievers like ibuprofen and other NSAIDs are also processed more slowly, which can elevate the risk of gastrointestinal irritation or bleeding [2]. However, this genotype is associated with a more favorable blood pressure response to the medication irbesartan [3]. There is also a slightly increased risk of blood clots when using combined oral contraceptives [4].

Increased sensitivity to warfarin; Slightly higher risk of NSAID-related GI bleeding.

What TT Genotype Means

Sample genotype: TT (Homozygous)

Two copies of the T allele lead to a reduction of approximately 40% in CYP2C9 enzyme activity [1]. This slow metabolism causes drugs like warfarin to accumulate, producing a stronger anticoagulant effect and a higher bleeding risk [1]. The risk of gastrointestinal bleeding from NSAIDs like ibuprofen is also significantly higher [2]. For diabetes management, this genotype may show a poorer response to sitagliptin but a better response to sulfonylureas [3] [4]. Additionally, there is an increased risk of venous blood clots when taking combined oral contraceptives [5].

High sensitivity to warfarin and NSAIDs; Increased risk of drug-induced side effects.

Related Variants

Variants with shared genetic architecture

rs1057910 · CYP2C9 Gene · Chr 10 · Medication Sensitivity

rs28371685 · CYP2C9 Gene · Chr 10 · Medication Metabolism

rs28371686 · CYP2C9 Gene · Chr 10 · Medication Response

Sources

Upstream and coding region CYP2C9 polymorphisms: correlation with warfarin dose and metabolism.

Genetically based impairment in CYP2C8- and CYP2C9-dependent NSAID metabolism as a risk factor for gastrointestinal bleeding: is a combination of pharmacogenomics and metabolomics required to improve personalized medicine?

Impaired (S)-warfarin metabolism catalysed by the R144C allelic variant of CYP2C9.

The CYP2C9 genotype predicts the blood pressure response to irbesartan: results from the Swedish Irbesartan Left Ventricular Hypertrophy Investigation vs Atenolol (SILVHIA) trial.

Risk prediction of developing venous thrombosis in combined oral contraceptive users.

Comparative efficacy and safety of sitagliptin or gliclazide combined with metformin in treatment-naive patients with type 2 diabetes: A single-center, prospective, randomized, controlled, noninferiority study with genetic polymorphism analysis.

Loss-of-function CYP2C9 variants improve therapeutic response to sulfonylureas in type 2 diabetes: a Go-DARTS study.

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Content updated August 2026.

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