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rs1410996 (CFH)

What you carry at this position in your DNA and what research says about it.

Macular Degeneration Risk: 6/10 evidence, 35 publications.

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Sample genotype (not yours): G/G

Higher Risk of Macular Degeneration

Two copies of the G allele are associated with a higher risk of developing age-related macular degeneration. This genotype is also linked to lower levels of complement factor H, leading to increased inflammation in the retina.

What this genotype means: Higher risk of age-related macular degeneration; Lower serum complement factor H levels; Increased complement system activation.

Sample genotype (not yours): A/A

Typical Risk of Macular Degeneration

Two copies of the A allele are associated with a lower risk of age-related macular degeneration. This genotype supports healthy complement system regulation and is linked to thicker retinal layers.

What this genotype means: Lower risk of age-related macular degeneration; Greater retinal layer thickness; Optimal complement system regulation.

Sample genotype (not yours): G/A

Moderately Increased Risk of Macular Degeneration

One copy of the G allele is linked to a moderately increased risk of age-related macular degeneration. This genotype represents an intermediate state of complement system regulation and retinal thickness.

What this genotype means: Moderately increased risk of macular degeneration; Intermediate complement pathway regulation; Slightly reduced retinal layer thickness.

About CFH

Gene function and biological role

Gene Function: The CFH gene encodes complement factor H, a critical regulatory protein in the immune system's complement pathway [1]. It acts as a natural brake to prevent the complement system from attacking the body's own healthy tissues [1]. When complement factor H function is altered, uncontrolled inflammation can damage delicate tissues, particularly in the eyes and kidneys [1]. This regulation is vital for maintaining cellular health and preventing chronic inflammatory diseases.

Variant Impact: The rs1410996 variant is a noncoding genetic change located within an intron of the CFH gene [2]. Although it does not directly alter the amino acid sequence of the complement factor H protein, it influences gene expression and protein levels [3]. This genetic variation is strongly linked to systemic complement activation and structural changes in the retina [4] [5]. It is one of the most widely studied genetic markers for susceptibility to age-related macular degeneration [2].

Key Insight: This noncoding variant can influence complement factor H levels in the blood, directly affecting how actively your immune system triggers inflammation in the eyes. Carrying the protective A allele is linked to thicker retinal layers, which may help preserve vision as you age.

Location: CFH. Chromosome 1 · 1q31.3 · 196.7 Mb

Genotype Frequencies

Estimated prevalence by population

Global 29.7%; European 35.0%; African 21.9%; East Asian 31.2%; South Asian 19.5%; Americas 25.3%; Ashkenazi 22.9%; Finnish 36.0%; Middle Eastern 31.1%; Amish 55.1%.

Estimated GG genotype frequency.

Global 48.9%; European 48.3%; African 49.8%; East Asian 49.3%; South Asian 49.3%; Americas 50.0%; Ashkenazi 49.9%; Finnish 48.0%; Middle Eastern 49.3%; Amish 38.3%.

Estimated GA genotype frequency.

Global 21.4%; European 16.7%; African 28.3%; East Asian 19.5%; South Asian 31.2%; Americas 24.7%; Ashkenazi 27.2%; Finnish 16.0%; Middle Eastern 19.6%; Amish 6.6%.

Estimated AA genotype frequency.

Associated Traits

Showing effects for G/G genotype

Organ Systems

Vision & Eye Health

Macular Degeneration. Evidence: 6/10. Source: PMID 23534868. Increased Risk.

Retinal Layer Thickness. Evidence: 6/10. Source: PMID 39904976. Reduced Thickness.

Respiratory Health

Lung Function. Evidence: 4/10. Source: PMID 26634245. Lower Ratio.

Immunity & Inflammation

Inflammatory & Circulating Protein Markers

Complement Activation. Evidence: 6/10. Source: PMID 34648354. Higher Activation.

Showing effects for A/A genotype

Macular Degeneration. Evidence: 6/10. Source: PMID 23534868. Typical Risk.

Retinal Layer Thickness. Evidence: 6/10. Source: PMID 39904976. Increased Thickness.

Lung Function. Evidence: 4/10. Source: PMID 26634245. Higher Ratio.

Complement Activation. Evidence: 6/10. Source: PMID 34648354. Typical Activation.

Showing effects for G/A genotype

Macular Degeneration. Evidence: 6/10. Source: PMID 23534868. Slightly Increased.

Retinal Layer Thickness. Evidence: 6/10. Source: PMID 39904976. Intermediate.

Lung Function. Evidence: 4/10. Source: PMID 26634245. Intermediate.

Complement Activation. Evidence: 6/10. Source: PMID 34648354. Intermediate.

What GG Genotype Means

What this genotype means for the people who carry it

Sample genotype: GG (Homozygous)

Research associates the G/G genotype with a significantly increased susceptibility to age-related macular degeneration (AMD) [1]. Studies indicate that individuals with this genotype often exhibit lower blood serum levels of complement factor H, which reduces the body's ability to control local inflammation [2]. This chronic, low-grade inflammatory state can lead to the accumulation of cellular debris under the retina, contributing to vision loss [3]. Additionally, this genotype is linked to thinner retinal pigment epithelium layers and higher levels of complement activation markers like C3d [4] [5]. While genetics play a major role, environmental factors such as smoking can further compound these risks.

Higher risk of age-related macular degeneration; Lower serum complement factor H levels; Increased complement system activation.

What AA Genotype Means

Sample genotype: AA (Homozygous)

The A/A genotype is highly protective against the development of age-related macular degeneration [1]. This genetic profile is associated with optimal levels of complement factor H, which efficiently regulates inflammation and protects retinal cells from immune-mediated damage [2]. Individuals with this genotype tend to have thicker retinal pigment epithelium layers, which is a marker of robust eye health [3]. Furthermore, this genotype is linked to lower systemic levels of complement activation fragments like C3d, indicating a well-balanced immune response [4]. These protective genetic factors contribute to a significantly lower likelihood of vision loss from macular diseases as you age.

Lower risk of age-related macular degeneration; Greater retinal layer thickness; Optimal complement system regulation.

What GA Genotype Means

Sample genotype: GA (Heterozygous)

The G/A genotype is associated with a moderate increase in the risk of developing age-related macular degeneration compared to those with the protective A/A genotype [1]. This heterozygous state typically results in intermediate levels of complement factor H and moderate complement pathway activation [2]. Studies show that individuals with one G allele have slightly thinner retinal layers than those with two A alleles, but are more protected than G/G homozygotes [3]. The presence of the G allele contributes to a higher likelihood of retinal debris accumulation over time [4]. Managing modifiable risk factors like diet and smoking remains an important strategy for supporting long-term eye health.

Moderately increased risk of macular degeneration; Intermediate complement pathway regulation; Slightly reduced retinal layer thickness.

Related Variants

Variants with shared genetic architecture

rs800292 · CFH Gene · Chr 1 · Macular Degeneration Risk

rs1061170 · CFH Gene · Chr 1 · Macular Degeneration Risk

rs10737680 · CFH Gene · Chr 1 · Macular Degeneration Risk

Sources

Translational mini-review series on complement factor H: genetics and disease associations of human complement factor H.

Noncoding variant in the complement factor H gene and risk of exudative age-related macular degeneration in a Chinese population.

Coding and noncoding variants in the CFH gene and cigarette smoking influence the risk of age-related macular degeneration in a Japanese population.

Impact of the common genetic associations of age-related macular degeneration upon systemic complement component C3d levels.

Pigmentation and Retinal Pigment Epithelium Thickness: A Study of the Phenotypic and Genotypic Relationships Between Ocular and Extraocular Pigmented Tissues.

CFH (rs1410996), HTRA1 (rs112000638) and ARMS2 (rs10490923) gene polymorphisms are associated with AMD risk in Spanish patients.

Haplotypes in the complement factor H (CFH) gene: associations with drusen and advanced age-related macular degeneration.

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Content updated August 2026.

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